Enzyme

4CL

Enzyme

4-coumarate:CoA ligase

Enzyme name

EC:6.2.1.12

Entry

Ligases;Forming carbon-sulfur bonds;Acid-thiol ligases

Class

4-coumarate:CoA ligase (AMP-forming)

Sysname

ATP + 4-coumarate + CoA = AMP + diphosphate + 4-coumaroyl-CoA [RN:R01616]

Reaction

AMP [CPD:C00020];diphosphate [CPD:C00013];4-coumaroyl-CoA [CPD:C00223]

Product

Species information

Rhizophora apiculata

Species name

Rhizophora apiculata is a species of eudicot in the family Rhizophoraceae (red mangrove family).

Species info

Gene sequence info

Rhizophora_apiculata.4CL.fa

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>evm.model.scaffold_446.269
METKNDQKDFIFRSKLPHIYIPSHLPLHTYCFENISKFRDNPCLINGATGDIYTYADVELISRKVAAGLNKLGIGQGDVIMLLLQNTPEFVFAFIGASYLGAMSTTANPFYTAAEIAKQATASKSKLIITQAVCAEKVREFAKENDVKVMTIDAPPEGFLHFSELTTADETDIPAVKISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFEIVKLMELVQKYKVTIAPFVPPIVLAIAKSPDVYKYDLSSIRTVMSGAAPMGKELEDTVRAMLPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGASLLRNQAGEICIRGDQIMKGYLNDPEASEGTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLINHPNISDAAVVPMKDEAAGEIPVAFVVRSNGCKIMEDEIKQYISKQVIFYKRLGRVFFTDAIPKAPSGKILRKELRGRLATGLPNGCP
>evm.model.scaffold_322.306
MAPQMKQEEQKEIIYRSKLPDIYIPKTLPLHSYIFENISQYASRPCLINGTTGKIYTYEEVELTARRVASGLNKLGIQHGEVIMLLLPNCPEFVLSFLGASYRGAIATAANPFFTPAEISKQAKASNTKLIITQACNYEKVKHLVLDDHQEDGVKLKIMCIDSTPDDSCLHFSQLTGDDHEIEDGFYDAPQANDVVALFYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYLHNEDVILCVLPMFHIYALNSIMLCGLRVGAAILLMPKFEIGTLLELMQRYKVTVAPIVPPIVLAIAKSSETDKYDLSSVRLLKSGAAPLGMEVQDTVRVKFPNARLGQGYGMTEAGPVLAMCLSFAKEPFDIKQGSCGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYTDDDDELFIVDRLKELIKYKGYQVPPAELEAMLLAHPSISDAAVVAMKDELAGEIPVAFVVRSDNSQVTEEEIKQFISKQVVFYKRIKRVFFIESIPKAPSGKVLRKTLRERLAFGLEN
>evm.model.scaffold_490.40
MISIASPEPAKPEISSPSPPPPPPSTESRVVFRSKLPDIPISSQLPLHTYCFEHLSKFSDRPCLISGSTGKIYSFSETHLIARRTAAGLSKLGIKKGDVIMILLQNCPEFAFAFMGASMLGAVTTAANPFYTSAEIFKQFSTSGAKLIITQSQYVDKLRDISSKENHPVLGQDFTVITVDDPPENCLHFSVISEAKDTENENEISRVSINPDDPVALPFSSGTTGLPKGVMLTHKSLITSVAQQVDGDNPNLYLTTEDVVLCVLPLFHIYSLNSVLLCSLRAGAAVLLMQKFEIGALLELIQRHKVSVAAVVPPLVLALAKNPMVEKFDLSSIRLVLSGAAPLGKELEEALQNRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGCSLGYNQPGEICIRGAQIMKGYLNDQQATENTIDIEGWLHTGDIGFVDDDDEIFIVDRVKEIIKFKGFQVPPAELEALLVGHPHIADAAVVPQKDEVAGEVPVAFVVRTNGFELTEQAVKEFIAKQVVFYKKLHRVYFVHAIPKSAAGKILRKDLRAKLAAALLHPTS
>evm.model.scaffold_592.37
MASPMPYLSHDNEHIFRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVTGKAYTYGDVVRDTRRFAKALRSLGIRKGHVVIVVLPNVAEYGIVALGIMAAGGVFSGANPAALESEIKKQVEAADAKLIFTNDLNYGKVKSLQRPVIVMSEINIEGAINFSELLNAADRAGDKFVYEDVQQADLCALPFSSGTTGISKGVMLSHRNLVANLCSSLFSVGPDMVGQVTTLGLIPFFHIYGITGICCATMKNKGKVVAMNRFELGTFLNALITQEVTFAPIVPPIILALVKNPIVDEFDLSRLKLRAIMTAAAPLAPELLTAFENKFPGVQVQEAYGLTEHSCITLTHGDPNKVHAIAKRNSVGFILPNLEIKFVDPETGRSLPRDTPGEICVRSQCVMQGYYNNEEETARTIDEDGWLHTGDIGYIDDDGDIFIVDRMKEIIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPVACVVMSKEAKESEGDIINHVASNVASYKKVRVVHFVDAIPKSPSGKIMRRLLKLKVAEKMQIQTKSQANQALMSN
>evm.model.scaffold_644.19
MNYIASPESSKPELSASTQSTETHVVFRSKLPEIPISNHLPLHTCCFENLPEYSDRPTGKVYTFSETHLIARKTAAGLCEMGVRKGDVIMILLQNCPEFVFSFMETSLPRKNRPKLGQDFAVITIDDPPEESLHFSIISRAKSIGVENGIPEFSIDPDDPVALPFSSGTTGLPKGVVLTHKNLVTSVAQQVDRENPNLYLTPEDVVLCLLPLFHVYSLNSVLLCSLRAGAVVLLMQKFEIGALLELIQRHKASVAAVVPPLVLALSKNPMVEKFDLSSIRLVLPGEAPLGKELVEALQKRVPQAILGQEGAKPCYSTHSKGKTKLMSTGQRTPNGIGLGNERISDGGLSQTLEIASSVTPKLATDCTYTPIAIGNTAKPRETIHPASTENSDNVTVAPLAQPSTFTFSHGGSGGCQDGYGMTEAGPVLSMCLGFAKQPLPTKFGSCGKVIRNAELKVIDPETGYLNDAQATANTIDIEGWLHTGDIGYVDQDDEIFIVERVKEIIRFKGFQVPPAELEALLAGHPHIADAAVVPQEKYQRAYS
>evm.model.scaffold_830.152
MEKLTDTSRPNNPRWFCPETGVYSSTHPSIPLPTDPFLDIVSHIFSHKHDGHTSLIDSLSGFSISYSELFPLIKSIASGLQKMGIKQGDVVLLLLPTSIHFPIVFLGALYLGAVVTPMNPLCSMQEINGRITDCNPCVAFTVPQNFGKLQSLEIPVISVPDNGILDDKRVEFRAFSKLLYGNSDMALSPVIMQQDTAAIVYSSGTTGASKGVLLTHRNFISMIELFVRFEASQYEYPSEKNVYLAILPMFHIYGLSLFVMGLMSLGCSIVVMRKFEVEEAVKVIGRYEVTHFPIVPPILGALTRTTKGDCGNSLKQVSCGAAPLSGKAIQEFVDTFPHVDFIQGYGMTELTAVGTRGFNTKNFRKYSSVGLLAPNTEAKVVDLETGSFLPPGGIGELYLRGPAVMKGYLNNREATALTIDKDGWLHTGDISYIDNDGYLYLLDRLKEMLKYKGFQIAPADLESVLISHPEILDVAVTSGAHEEYGEIPVAFVVKRNGSMLTEGDIMNYVAGQVAPHKKDKGEFLIDFGCKCKGGLARAHHSCTDTWCRARGANKCEICQEVAINVPPPESPPTACILFLEAKNARKHCLQTMARPERCDVLL
>evm.model.scaffold_945.360
MTYSSPRPPVHLPTDPNLSLTSFLFQSNLSSPNSTALIDAASGETLTFHQLKVEVSKLAHALLKLGIRKNDVVLLFAPNSTRFPICFLSIVSIGAVASTCNPAYTVGEVSKQVGDCRPKLIVTVPQLLEKVQKFNLPLILLESPSSNNPILKSFKLWEYPDLIRQSGEVSDLPTNDVQQNDVAALMYSSGTTGTSKGVILTHKNFIATSMMVTADQDRYKDPKNMFLCFLPMFHIFGLSVILYSQLRRGNAVVCMARFELEKALRSVEKFSVTHMYVVPPVMIALAKQSAVLKRFDLSSLREIGGGAAPLAKDVMEACAKILPNVVIIQGYGMTETCGIVSIEDSRDGTRLSGSTGKLVSGVESQIVSVDTLKPLPPNQVGEICLRGPNMMQGYLNNPQATKLAIDNQGWVHTGDIGYFDGEGQLFVVDRIKELIKCYGFQVAPAELEGLLLSHPEILDAVVIPFPDPKAGEVPIAYVVRSPNSALTEEDIQKFIAKQVQTVKGEDPGNNF
>evm.model.scaffold_1028.95
MEKSGYGRDGIYRSLRPTLSLPKDANLSMVSFLFRNSDSYPQKPALIDADSSLTMSFAELRSTVVKAAHGFRHLGISRRDVVLIFAPNSYQFPVCFLAVTSLGAIVTTANPLYTKAEIFKQIKDSNPKLVITVPELWDKVRDSNLPAVFLGAKESVSIHCSRTKGIKSFHDLVELGGSNSDFPATRVKQTDVAALLYSSGTTGTSKGVVLTHGNFIAASAMVTMDQEMAGELHLVFLCFLPMFHVFGLAVITYSQLQKGSTVVSMAKFDFEAVLRAVDEYRVSHLWVVPPIILALTKHTSILKKYDLSSLQYIGSGAAPLGKDLMEECAKNFPHAAVAQGYGMTETSGIVSMENHRVGFRHTGSAGTLAAGIESQIVSVDTMKPLPPNQMGEIWVRGPNMMQGYLSNPQATKQTIDKKGWVHTGDLGYFDEEGQLFVADRIKELIKYKGFQVAPAELEGLLVSHPKILDAVVIPFPDAEAGEVPVAYVVRSPDSSLTEEDTQNFISDQVAPFKRLRRVTFINSVPKSASGKILRRELIQKAQSNDIAPTESPDHRLQLEYHPIHVYGWSIVGSGLPCQSVGLSSSSFKKTSLLEQLAYNADKKHSELDVMVTQAIWKASQLADFQTTLMFSAVYYYNGGDGENISSKDDHTTTAVMKIEMHCEGCASKITKLARNLQGVETAKAETDTNKLTVIGKVDPLQIQEILQQKTKKKVDLISPQVKKQDPNKTNNNNKSTEKPQQSAKPKASVTTAILKLEFHCHGCIERIHKIVSKTKGVQEMAVDKQKETVTVKGTMDAKALAEVLNEKLKRPVSIQPPKKEKEEGPKGGGNDGGGGKKNNGGGGGGGGGGPATMEGNRMDFMAQPGYGPGYGYMGQPVYGNGYMGQPVYGNGYAGQPVLLANGYMGQPVYGYGQEYGYGYGYGAVPGYPAHMKFNDENPNACSMM
>evm.model.scaffold_1533.199
MEAKNDQQDFIFRSKLPDIYIPNHLPLHSYCFENISQFRDNPCLIDGATGDIYTYADVELTSRKVASGLSKLGIGQGDVIMLLLQNSPEFVFAFLGASYLGAMTTTANPFYTPAEIAKQAMASKSKLIITQAVYSEKVRQFARQNNVKLMTIDAPPEDFLHFSDLTKADETEIPAVKINPDNVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFEIITLMELVQRYKVTVAPFVPPIVLAIAKSPDVDKYDLSSIRTVMSGAAPMGKELEDTVRAKLPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGASLPRNQAGEICIAGDQIMKGYLNDPEATERTIDKDGWLHTGDIGYIDNDDELFIVDRLKELIKYKGFQVAPAELEAMLINHPNISDAAVVPMKNDAAGEIPVAFVVRSNGSKISEDEIKQYISKQVIFYKRLGRVFFVDAIPKAPSGKILRKELRARLASGPPN
>evm.model.scaffold_2297.15
MELSRPSKLKRRAITLDSCEFELILSTCSTREFIRAEVIQSSVGAIMYSSGTTGTVKGVMLTHWNFMAVVSAFHTVKAARRESVAGADALHVVVMERFDLRRMLMAVEEFRVTDIAVAPLVVVAMTKSDLTKGYDLMSLGKLGCGGAPLGKVVMAAFTAKFPSVMLWQGYGLTESTGANASSSDALSPGQLGELWVRGPTIMKGYVDDPEAKSATLVAGRWLRIGDLCYIDEDGFLFVVERLKELIKYKGFLWLNWSSCSSPIQIVDVAVLRGFSDEAVQVPMAFVVSQPPSHLSERDIMEFVTKQINLINALANIFCLSTVCFISSMPKNAAGKILRKDQTMELKLEASHSGIASGRTAEYCFPNLFKASPVDRVEDSIHKQ

Gene tree

Gene tree

Sheng jun & Dong yang Teams, Yunnan agriculture University